The ultimate multiple cloning site: contains 59 unique restriction sites

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DNA Vector Systems

Multiple Cloning Site Vector pMCS5

Features:
  • standard cloning into a site upstream from a T7-RNA-polymerase-promoter
  • end-cloning
  • labeling
  • linearization of recombinant clones
  • blue/white selection
  • generation of single-strand DNA (using the f1 origin)

pMCS5 vector map
Product Description:

The new cloning vector pMCS5 contains the ultimate multiple cloning site (MCS) with 59 unique restriction sites. Included are the recognition sites for many commonly used restriction enzymes, providing a suitable cloning site for almost any application.

The scientist can chose between 46 unique hexamer sites, two heptamer sites and the recognition sites for all ten known octanucleotide-specific endonucleases. In addition, the well-defined 18-mer sequence of the extremely rarely cutting enzyme I-Sce I is located at one terminus of the MCS, enabling the linearization of recombinant clones. I-Sce I does not recognize a palindrome and can thus be used for labeling and end-cloning. Further it can be utilized for strand protection in unidirectional deletion experiments. Included in the MCS are also restriction sites which occur very infrequently in human DNA such as Mlu I, Nru I and Spl I.


Restriction Enzyme Recognition sites in the 259-bp MCS cassette

Recognition Sequences: Enzymes: Properties:
Heptamer sequences Bae I,RSr II
Octamer sequences Asc I, Fse I, Not I, Srf I
Pac I, Swa I
Pme I, SgrA I, Sse8387 I, Sfi I

only GC pairs
only AT pairs
Hexamer sequences Mlu I, Nru I, Spl I, Cla I
Acc I, Acc I, Age I, Apa I, Avr II, BamH I, Bbe I, Bgl II, Bsp120 I, Bsp I, BspM I, BssH II, BstB I, Ecl136 II, EcoR I, EcoR V, Ehe I, Hind III, Hpa I, Kas I, Kpn I, Mun I,
Nar I, Nco I, Nde I, Nhe I, Nsi I, Nsp7524 V, Pml I, Ppu I,
Pst I, Sac I, Sac II, Sal I, Sma I, SnaB I, Spe I, Sph I, Xba I,
Xho I, Xma I, Xma III

very infrequent in human DNA
since the plasmid was produced in the dam+
strain DH5alpha ,the Cla I
site is methylated and
cannot be cleaved
18-mer sequence I-Sce I

highly unlikely in any DNA


59 unique restriction sites Multiple Cloning Site Vector pMCS5


ORDER INFORMATION, SHIPPING STORAGE:
order# description amount
PMCS5 pMCS5 vector DNA, lyophilized 5 µg
shipped at RT; store at 4°C


Downloads: pMCS5 sequence, Handbook

For further Vector System products please download the Vector Systems brochure (PDF, 3,9 MB)

 
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